Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912797.1_cds_XP_016462882.1_56058
CDS Infomation

[gene=LOC107785963] [db_xref=GeneID:107785963] [protein=pentatricopeptide repeat-containing protein At5g62370-like] [partial=3'] [protein_id=XP_016462882.1] [location=complement(<20..1459)] [gbkey=CDS]
Sequence

ATGAGCAAGCATAGACTTGGACTACACCATTGGTTGTGCTTCTCCTATCTCTCTAGAACA
ACAAAGAGACGTTTTACTGCTTGCCATGTACCTAGTGAAGCAATATCATGTGATGTTCCC
ACATCCTCCCCAATTAATAATCACAAGACCTTGTGTTTTTCACTTGTAGAGCAGTTAATA
CTTCGCGGGTTATTCGGTTTAGCTCAGAAAGTGATTCAGAGAATCATCAAGCAATCCTCA
TCAGTCTCTGAAGCTATCTCAGCCGTTGAATTCTCCATTTCTCGCGGTATCGAGCCTGAT
GCAACTAGCTATAGTTTTCTCATTCGACAACTCGTGGCATCTGGTGAAACCCAAATGGCT
GAAGATATTTATGTATATTGCATTTTGAAGAGAGGTATTGAACCGAAAGACCAGTCTTTA
TTGAATTCAATGGCCATTTGTTATTGTAATTTGGGTAAATTAGAGGAAGCAAAATTGCTT
TTTGATAAACTATTGGATATGAAATTGAGGCCTTGTAGTAGCACGTGTAATGCGCTTATT
AAGGGATTTTGTGGCCAACATAGCATCTTGGATGGGTTTGATGTTTTTGTAGTGGCTGTT
GATGCAGGAGTATCACTAAGTTTCAGTTGTTACAATAGGTTAGTGGATGGCTTGTGCCAT
CGGGGGTTCTTAGATGAGGCACTCTATGTGTTTGATGTAATGTGTGAGAGAGGGGTGACA
CCCAATGTTCATTTGTTTAAGACATTGGTTCTTTCGTTGTGTAAGAGGGGTCGAGTCGAG
GAAGCTGAGTTGTTGAGCATGGATATGGAGTCTTATGGTTTTGTTCTGGATAAAATCATG
TACACAACTCTTATTAACGGGTATTCGAAGAACAAGAAAATGAAAATGGCTATGAGGGTG
TTTCTTAGAATGCTTAAGTTGGGATGTGCACCGGATAAGTATACTTACAACACGCTGATG
CACGGGTTTTTTAACTTGGGCATGTTGGACAAGGGTTGGGTGCTTCATCAGCAGATGGCT
GAATTTGGATTAGAACCTGATGCAGTAAGTTACCAAATCATGATTGGCAAGTATTGCAAG
GATCATAAAGTTGATTGTGCGTTGATGCTGTTAAATAACATGATTCAGTGCAACGTTGCT
CCCAGTGTGCACTCTTATACTGCTTTAATTGCTGCGCTTTATAAAGAGAATCGGTTAGCA
GAAGTAGATGTCTTGTACAATAAGATGTTGGATAATGGATTGGTTCCTGACCATGTTTTG
TTTTTTACCTTGGTCAACAATCATCCAAGAGGGTCAGAGATTACTCTAGCATGCACATTT
TTGCGGGCAATTGCCAAAAATGGTTGTGGTATTGACCTTTCTAACATCCCTAGCACTATC
AGTCAAAAAGTTACTACAGATATCATGTCTGATATTGATCATCTCTTGGGAGAAATTGTG

Peptide Sequence

PEP ID

XP_016462882.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At5g62370-like, partial [Nicotiana tabacum]
Sequence

MSKHRLGLHHWLCFSYLSRTTKRRFTACHVPSEAISCDVPTSSPINNHKTLCFSLVEQLI
LRGLFGLAQKVIQRIIKQSSSVSEAISAVEFSISRGIEPDATSYSFLIRQLVASGETQMA
EDIYVYCILKRGIEPKDQSLLNSMAICYCNLGKLEEAKLLFDKLLDMKLRPCSSTCNALI
KGFCGQHSILDGFDVFVVAVDAGVSLSFSCYNRLVDGLCHRGFLDEALYVFDVMCERGVT
PNVHLFKTLVLSLCKRGRVEEAELLSMDMESYGFVLDKIMYTTLINGYSKNKKMKMAMRV
FLRMLKLGCAPDKYTYNTLMHGFFNLGMLDKGWVLHQQMAEFGLEPDAVSYQIMIGKYCK
DHKVDCALMLLNNMIQCNVAPSVHSYTALIAALYKENRLAEVDVLYNKMLDNGLVPDHVL
FFTLVNNHPRGSEITLACTFLRAIAKNGCGIDLSNIPSTISQKVTTDIMSDIDHLLGEIV

Transcript Sequence

Gene sequence data has not been registered.